SIBO Breath Test

Find out if bacteria in the wrong place are behind your bloating, gas and stubborn gut symptoms.

Small Intestinal Bacterial Overgrowth (SIBO) happens when bacteria that belong in the large intestine build up in the small intestine. This at-home breath test measures the gases those microbes produce — hydrogen, methane and, on some tests, hydrogen sulfide — to show whether overgrowth is present and which type you have.

 
This test detects
Up to 3 gases
Hydrogen, methane and hydrogen sulfide
Technology
Breath Gas Analysis
Non-invasive, collected at home

"I've cut out gluten, dairy and half my diet. I still look six months pregnant by dinner time."

This is one of the most common things I hear. When bloating builds through the day, when fiber and probiotics make you feel worse, or when IBS is the only explanation you’ve been given, SIBO is often part of the picture.

Removing foods only manages symptoms. The breath test shows whether bacteria are fermenting your food too early in the digestive tract — and which gas they produce, because each type needs a different approach.

Understanding the Test

What is the SIBO Breath Test?

Your body doesn’t produce hydrogen or methane on its own — only gut microbes do. After a short prep diet and an overnight fast, you drink a sugar solution (lactulose or glucose) and collect breath samples at set intervals over about two to three hours.

If bacteria in the small intestine ferment that sugar early, the gases show up in your breath sooner and at higher levels than they should. The pattern of gases over time tells us whether overgrowth is present and which type it is.

That distinction matters. Hydrogen, methane and hydrogen sulfide overgrowth behave differently and respond to different protocols — so the result directly shapes the diet, herbal or prescription approach we use.

What the test measures

SIBO Breath Test

1 Hydrogen (H₂)

Classic bacterial overgrowth

Key marker
2 Methane (CH₄)

Methane overgrowth (IMO), linked to constipation

Key marker
3 Hydrogen Sulfide (H₂S)

Measured on 3-gas tests only

Included
4 Baseline Reading

Your gas levels before the test drink

Included
5 Timed Samples

Collected at set intervals over 2–3 hours

Included
6Gas Curve Pattern

How early and how high gases rise

Included

Could This Be You?

Signs a SIBO breath test is worth doing

Digestive symptoms

🤰 Bloating that builds through the day

Flat in the morning, visibly distended by evening

🚽 Constipation, diarrhea, or both

Methane tends to slow things down; hydrogen often speeds them up

🔥 An IBS diagnosis with no clear cause

SIBO is a common finding in people told they have IBS

😣 Feeling worse on fiber or probiotics

Bacteria may be feeding on them too early

🥗 Gas, belching or abdominal pain after meals

Early fermentation produces gas higher in the gut

Symptoms beyond the gut

These are the symptoms many people never connect to SIBO — but that the breath test frequently helps explain.

Overgrowth affects absorption, not just digestion.
Bacteria in the small intestine can compete for nutrients like B12 and iron and interfere with fat absorption — which is why SIBO can show up as low energy, mood changes and stubborn deficiencies as often as gut symptoms.

What the Breath Test Reveals

Six answers.
One clear direction.

The breath test doesn’t just say yes or no. The type of gas, how early it rises and how high it goes all shape the treatment plan — and give us a baseline to retest against.

 
01

Is Overgrowth Present?

An early rise in breath gases points to bacteria fermenting sugar in the small intestine, where there should be relatively few.
  • Positive
  • Borderline
  • Negative
02

Hydrogen-Dominant SIBO

The classic form. Bacteria ferment carbohydrates and produce hydrogen, often with bloating and looser stools.

  • Bloating
  • Diarrhea
  • Gas
03

Methane Overgrowth (IMO)

Methane-producing archaea slow gut motility. Commonly linked to constipation and a heavy, full feeling.

  • Constipation
  • Fullness
  • Slow transit
04

Hydrogen Sulfide

Some bacteria convert hydrogen into hydrogen sulfide, which can irritate the gut lining. Only detected on 3-gas tests.

  • Urgent diarrhea
  • Sulfur sensitivity
  • Body aches
  • Firmicutes ratio
05

Treatment Direction

Each gas type responds to different diet, herbal and prescription strategies — so the result decides the protocol.

  • Diet approach
  • Antimicrobials
  • Motility support
06

A Baseline to Retest

Your gas levels give us a starting point. Retesting after treatment confirms whether overgrowth has cleared.

  • Starting levels
  • Progress check
  • Relapse watch

Reading the Results

Timing is everything

The small intestine should contain relatively few bacteria, while the large intestine is full of them. When you drink the test solution, it normally reaches the large intestine before significant gas is produced.

If gas rises early — before the sugar would reach the large intestine — it suggests bacteria are fermenting it higher up, in the small intestine. A sustained methane level, on the other hand, points to methane overgrowth regardless of timing.

Results are always interpreted alongside your symptoms and history. A borderline result with classic symptoms can be just as meaningful as a clearly positive one.

Intestinal permeability — visualized
Breath gas over time — illustrative pattern 90 min Small intestine window Threshold 060120180 min
Early rise — suggests SIBOLate rise — expected in the large intestine

Illustrative only. Commonly used criteria: hydrogen rise of ≥20 ppm within 90 minutes; methane ≥10 ppm at any point. Your lab’s criteria may differ.

Up to 3 gases

hydrogen, methane and hydrogen sulfide

2–3 hours

of timed breath samples, at home

Non-invasive

no needles, no clinic visit

Retestable

a clear baseline to track progress

Two tests, two parts of the gut

1 SIBO Breath Test — Small Intestine

Shows whether bacteria are overgrowing where they shouldn’t be, and which gas they produce

2 Stool Testing — Large Intestine

GI-MAP or BiomeFx map pathogens, parasites, yeast, diversity and gut-health markers

The Gut-Brain Connection

Why I often pair it with a stool test

A breath test and a stool test answer different questions. The breath test looks at the small intestine; stool testing looks at the large intestine. Together they cover the whole digestive tract, so nothing is missed.

The goal isn’t to run every test — it’s to choose the ones that explain your symptoms and guide the right plan.

  • The SIBO breath test shows overgrowth in the small intestine and its gas type.
  • The GI-MAP looks for specific pathogens, parasites and fungi, plus digestion and inflammation markers. GI-MAP →
  • BiomeFx maps the whole microbial community, its diversity and functional potential. BiomeFx →

Breath Test vs. Stool Test

Why a stool test
can’t diagnose SIBO

Stool samples reflect the large intestine. SIBO lives in the small intestine — which is why it needs a different test.

 

Stool Test Alone

SIBO Breath Test

How It Works

A few breaths at home.
A clear answer.

No clinic visit and no needles. Here is exactly what working with Samantha looks like from start to finish.

 

01

Free Discovery Call

We talk through your symptoms, history and health goals to confirm whether the SIBO breath test is the right starting point for you.

02

Consultation and Kit Order

After your initial intake session, I order your breath test kit. It’s mailed to your home with full prep and collection instructions.

03

Prep and Collect at Home

Follow a simple prep diet for one day, fast overnight, then drink the test solution and collect breath samples at set times.

04

Your Treatment Plan

We review your gas curves together and I build your protocol — diet, antimicrobials and motility support — then retest when it’s time.

18+

years in practice

Why Work With Samantha

Clearing SIBO is
only half the job.

SIBO has a reputation for coming back. That’s usually because the overgrowth was treated, but the reason it developed — low stomach acid, slow motility, stress or nutrient gaps — was never addressed. I treat both, so your results last.

I’m Samantha Gilbert, a Certified Functional Nutrition Counselor with over 18 years of experience. The gut–brain connection is central to my practice, and many clients with anxiety, OCD, ADHD and depression find their gut is a missing piece.

  • Treatment matched to your gas type — hydrogen, methane and hydrogen sulfide each get their own protocol.
  • Relapse prevention built in — motility support, digestion and food reintroduction, so you’re not stuck on a restrictive diet.
  • All sessions are fully virtual — I work with clients across the US and internationally.

Common Questions

Everything you need to
know before you start

It’s a non-invasive at-home test that measures hydrogen and methane — and on some tests hydrogen sulfide — in your breath after you drink a sugar solution. Because only gut microbes make these gases, rising levels early in the test point to bacterial overgrowth in the small intestine.

Preparation usually includes avoiding antibiotics and certain supplements for a period beforehand, following a simple low-fermentation diet the day before, and fasting overnight. Your kit includes full instructions, and I’ll review your medications and supplements with you before you start.

Absolutely—and this is often one of the most important things my clients learn. Around 90% of serotonin is produced in the gut, and dysbiosis disrupts that production. Elevated zonulin allows bacterial toxins to enter the bloodstream and cross the blood-brain barrier, contributing to neuroinflammation. H. pylori depletes zinc and B12, both of which are critical for mental health. In my practice, SIBO breath tests and GI Map and BiomeFx stool tests regularly uncover gut-related factors behind symptoms that have been treated as purely psychological for years.

Results are typically ready within 2 weeks after the lab receives your samples. We then book an appointment where I walk you through your gas curves and build your treatment plan

Often, yes. The breath test looks at the small intestine; a stool test like the GI-MAP with Zonulin or BiomeFx looks at the large intestine. Together they show the whole digestive tract.

Usually. Retesting after a round of treatment confirms whether the overgrowth has cleared and helps us decide when to move into the rebuilding and relapse-prevention phase.

The SIBO breath test ordered through my practice is generally an out-of-pocket cost. During your free discovery call I’ll walk you through current pricing and whether it’s the right starting test for you.

Ready to find out what's
really going on in your gut?

Book your free 20-minute discovery call with Samantha. We will talk through your symptoms and history and figure out whether GI Map testing is the right next step for you.